Extent and regulation of summer methane oxidation in northern lakes. S.D.Thottathil, P.C.J. Reis, P.A. del Giorgio, Y.T. Prairie (2018). Journal of Geophysical Research-Biogeosciences 123: 3216-3230 https://doi.org/10.1029/2018JG004464
Biogeochemical control on fluorescent dissolved organic matter dynamics in a large freshwater lake (Lake Biwa, Japan). S.D. Thottathil, K. Hayakawa, Y. Hodoki, C. Yoshimizu, Y. Kobayashi, S. Nakano (2015). Limnology and Oceanography 58: 2262-2278
Identification of species and genotypic composition of Cryptomonas (Cryptohyceae) populations in the eutrophic lake Hira, Japan using single-cell PCR. H. Nishino, Y. Hodoki, S.D. Thottathil, K. Obayashi, Y. Takao, S. Nakano (2005). Aquatic Ecology 49: 263-272.
Influence of allochthonous input on autotrophic-heterotrophic switch-over in shallow waters of a tropical ecosystem (Cochin Estuary), India. S.D. Thottathil, K.K. Balachandaran, N.V. Madhu, G.V.M. Gupta, S. Nair (2008). Estuarine Coastal and Shelf Science 78: 551-562.
Tidal switch on metabolic activity: Salinity induced responses on bacterioplankton metabolic capabilities in a tropical estuary. S.D. Thottathil, K.K. Balachandran, K.V. Jayalakshmi, G.V.M. Gupta, S. Nair (2008). Estuarine Coastal and Shelf Sciences 78: 665-673.
CO2 supersaturation and net heterotrophy in a tropical estuary (Cochin, India): Influence of anthropogenic effect. V.M. Gupta, S.D. Thottathil, K.K. Balachandran, N.V. Madhu, P. Madeswaran, S. Nair (2009). Ecosystems 12: 1145-1157.
Short-term variability of water quality and its implications on phytoplankton production in a tropical estuary (Cochin Backwaters –India). N.V. Madhu, K.K. Balachandran, G.D. Martin, R. Jyothibabu, S.D. Thottathil, M. Nair, T. Joseph, K.K. Kusum, (2010). Environmental Monitoring and Assessment 170: 287-300.
The September 2004 stench off the southern Malabar Coast – A consequence of holococcolithophore bloom. N. Ramaiah, J. T. Paul, V. Fernandes, T. Raveendran, O. Raveendran, D. Sundar, C. Ravichandran, D. M. Shenoy, G.Mangesh, S. Kurian, V.J. Jerson, S.D. Thottathil, N. V. Madhu, S. Sreekumar, P. A. Lokabharathi, S. R. Shetye. 2005. Current Science, 88 (4): 551-554.